File:A current view of the tree of life, encompassing the total diversity represented by sequenced genomes.jpg
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Summary edit
| Description |
Русский: Дерево жизни по данным за 2016 год. English: "The tree includes 92 named bacterial phyla, 26 archaeal phyla and all five of the Eukaryotic supergroups. Major lineages are assigned arbitrary colours and named, with well-characterized lineage names, in italics. Lineages lacking an isolated representative are highlighted with non-italicized names and red dots. For details on taxon sampling and tree inference, see Methods. The names Tenericutes and Thermodesulfobacteria are bracketed to indicate that these lineages branch within the Firmicutes and the Deltaproteobacteria, respectively. Eukaryotic supergroups are noted, but not otherwise delineated due to the low resolution of these lineages. The CPR phyla are assigned a single colour as they are composed entirely of organisms without isolated representatives, and are still in the process of definition at lower taxonomic levels. The complete ribosomal protein tree is available in rectangular format with full bootstrap values as Supplementary Fig. 1 and in Newick format in Supplementary Dataset 2." |
| Date | |
| Source | http://www.nature.com/articles/nmicrobiol201648 |
| Author |
Laura A. Hug Present address: Department of Biology, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada. Affiliations Department of Earth and Planetary Science, UC Berkeley, Berkeley, California 94720, USA Laura A. Hug, Karthik Anantharaman, Alexander J. Probst, Cindy J. Castelle, Cristina N. Butterfield, Brian C. Thomas & Jillian F. Banfield Department of Marine Science, University of Texas Austin, Port Aransas, Texas 78373, USA Brett J. Baker Department of Plant and Microbial Biology, UC Berkeley, Berkeley, California 94720, USA Christopher T. Brown & Alex W. Hernsdorf Sector of Decommissioning and Radioactive Wastes Management, Japan Atomic Energy Agency, Ibaraki 319-1184, Japan Yuki Amano & Kotaro Ise Graduate School of Science, The University of Tokyo, Tokyo 113-8654, Japan Yohey Suzuki Department of Ecology and Evolutionary Biology, UC Santa Cruz, Santa Cruz, California 95064, USA Natasha Dudek Departments of Medicine and of Microbiology and Immunology, Stanford University, Stanford, California 94305, USA David A. Relman Veterans Affairs Palo Alto Health Care System, Palo Alto, California 94304, USA David A. Relman Department of Environmental Science, Policy, and Management, UC Berkeley, Berkeley, California 94720, USA Kari M. Finstad, Ronald Amundson & Jillian F. Banfield Contributions L.A.H. and J.F.B. defined the research objective. L.A.H. generated data sets and conducted phylogenetic tree inferences. L.A.H., B.J.B. and J.F.B. conducted data analysis. L.A.H., B.J.B., K.A., C.T.B., A.J.P., C.J.C., C.N.B., A.W.H., Y.A., K.I., Y.S., N.D., D.A.R., K.M.F., R.A., B.C.T. and J.F.B. contributed to metagenome binning and genome analysis. L.A.H. and J.F.B. wrote the manuscript with input from all authors. All authors read and approved the final manuscript. |
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