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File:Covid-19 symptoms in finland 1.svg

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Covid-19 symptoms in Finland

Summary

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Description
English: Covid-19 symptoms in Finland, cumulative to 19.6.2021
Date
Source Own work
Author Merikanto
SVG development
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Soucce od data_ THL open data 19.6.2021

Rajapinnan osoite: https://sampo.thl.fi/pivot/prod/fi/epirapo/omaolosymp/fact_epirapo_omaolosymp.json

Aineiston aihealue: epirapo

Aineiston nimi: omaolosymp

https://thl.fi/fi/tilastot-ja-data/aineistot-ja-palvelut/avoin-data/itseilmoitetut-koronaoireet-suomessa-covid-19-

    3. Incidence of symptoms of Covid-19 by province, Finland
    4. reports of symptoms per 100 000 pop.
    5. all but not Ahvenanmaa
    6. "R" script
    1. 20.6.2021 0000.0001


library(geofi) library(ggplot2) library(dplyr) library(rjstat) library(stringr) library(tidyr)

library(svglite) library(sf) library(viridis)

vuosi=2021 viikko=15

widthi=8 heighti=14

tulosfilee1="Covid-19_symptoms_in_finland_1.svg"


sahopivaki<-c(29789, 128756, 194316, 100226, 1667203, 41060, 73061, 171364, 77689, 252676, 166623, 117350, 61172, 535044, 165569, 409418, 245602, 211215, 218624, 169684, 481478 )


print (length(sahopivaki))


  1. stop(-1)

baseurl1<-"https://sampo.thl.fi/pivot/prod/fi/epirapo/omaolosymp/fact_epirapo_omaolosymp.json" request1<-"?column=hcdmunicipality2020-445222&filter=measure-460489"


url1 <- paste0(baseurl1, request1) cube1 <- fromJSONstat(url1, naming = "label", use_factors = F, silent = T) res1 <- cube11 head(res1, 30)


shps00<-res1[,1] tapaukset00<-res1[,2]

  1. shps00

shps1<-shps00[1:21] tapaukset<-tapaukset00[1:21]

shps1 tapaukset


thldata1<-data.frame(shps1,tapaukset)

names(thldata1)<-c("sairaanhoitop_name_fi","tapaukset")

thldata1

d1 <- get_municipalities(year = 2020)

  1. shpt1 <- d1  %>% group_by(sairaanhoitop_name_fi) %>% count(maakunta_code)
  2. shpt1 <- d1  %>% group_by(sairaanhoitop_name_fi) %>% count()

shpt1 <- d1  %>% group_by(sairaanhoitop_name_fi) %>% count()

shpt1

  1. stop(-1)


totaali <- merge(shpt1, thldata1, by="sairaanhoitop_name_fi")

  1. totaali <- merge(totaali00, savaki1, by="sairaanhoitop_name_fi")
  1. totaali

totaali$vaesto <- sahopivaki


totaali

  1. stop(-1)


tapauksia1<-as.double(totaali$tapaukset) vaesto1<-as.double(totaali$vaesto)

ilmaantuvuus<-tapauksia1*0.0

ilmaantuvuus0<-(100000*tapauksia1)/vaesto1 ilmaantuvuus=round(ilmaantuvuus0, digits = 0)

print("RAKO")

  1. print(tapauksia1)
  2. print(vaesto1)
  3. print(ilmaantuvuus)
  1. stop(-1)


print (head(totaali, 40))


len1=length(tapauksia1)


totaali$ilmaantuvuus <- ilmaantuvuus


totaali


  1. stop(-1)

daata1=totaali

my_breaks = c(100,2000,5000,10000,20000,50000, 100000,200000,50000, 100000)


otsikko="Koronaoireiden ilmaantuvuus 19.6.2021 mennessa." alaotsikko="Oire-ilmoituksia 100000 asukasta kohden." footeri="Muut paitsi Ahvenanmaa"

p2 <- ggplot(daata1, aes(fill = as.integer(ilmaantuvuus), color=as.integer(ilmaantuvuus) ) ) +

    1. geom_sf(colour = alpha("white", 1/3)) +
 geom_sf()+
 geom_sf_text(aes(label = tapaukset),
              size = 7,
              face = "bold",
              color = "black") +
  theme(legend.position = "none")+
# labs(subtitle = "Data")+
 ## ggtitle(otsikko) +
 labs(title = otsikko,
             subtitle = alaotsikko,
             caption =footeri)+
 theme(plot.title = element_text(size = 20, face = "bold")) +
 theme(plot.subtitle = element_text(size = 16, face = "bold")) +
 theme(plot.caption = element_text(size = 16, face = "bold")) +
 theme(axis.text=element_text(size=15),
       axis.title=element_text(size=15,face="bold")) +
# theme(legend.key.size = unit(2, 'cm')) +
 xlab("Pituusaste")+
 ylab("Leveysaste") +
 scale_fill_viridis_c()
 ##  scale_fill_viridis_c(
    1. breaks = my_breaks, labels = my_breaks, option = "viridis",

## trans = scales::pseudo_log_trans(sigma = 0.001) 

## )



svg(filename=tulosfilee1, width=widthi, height=heighti, pointsize=12)

p2

dev.off()







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Date/TimeThumbnailDimensionsUserComment
current07:41, 20 June 2021Thumbnail for version as of 07:41, 20 June 2021720 × 1,260 (221 KB)Merikanto (talk | contribs)Update: incidence of Covid-19 symptom reports by region
14:27, 19 June 2021Thumbnail for version as of 14:27, 19 June 2021720 × 1,260 (198 KB)Merikanto (talk | contribs)Uploaded own work with UploadWizard

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