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English: Genome-wide haplotype heterozygosities using haplotype blocks constructed from low-LD (linkage disequilibrium) SNPs only. We define genome-wide haplotypes as nonoverlapping blocks of 5 to 15 contiguous SNPs in which all inter-SNP mean recombination rates are above 0.5 cM/Mb. (A) Mean expected haplotype heterozygosity in each population, with standard deviations across the 22 autosomes. (B) The correlation between mean haplotype heterozygosity and geographic distance from Addis Ababa. Population colors and symbols follow Figure File:Individual-level human population structure.png.
Date Published: August 14, 2014
Source Verdu P, Pemberton TJ, Laurent R, Kemp BM, Gonzalez-Oliver A, Gorodezky C, et al. (2014) Patterns of Admixture and Population Structure in Native Populations of Northwest North America. PLoS Genet 10(8): e1004530. doi:10.1371/journal.pgen.1004530 http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1004530
Author Paul Verdu, Trevor J. Pemberton, Romain Laurent, Brian M. Kemp, Angelica Gonzalez-Oliver, Clara Gorodezky, Cris E. Hughes, Milena R. Shattuck, Barbara Petzelt, Joycelynn Mitchell, Harold Harry, Theresa William, Rosita Worl, Jerome S. Cybulski, Noah A. Rosenberg , Ripan S. Malhi
Other versions
Genome-wide haplotype heterozygosities
Genome-wide haplotype heterozygosities using haplotype blocks constructed from random SNPs
PCA plot
PCA plot. Cropped.
Worldwide Admixture structure
Admixture structure of European, East Asian, and American
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