File:Spectra of IBS sharing between simulated populations that differ only in admixture time.png

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English: Spectra of IBS sharing between simulated populations that differ only in admixture time. Each of the colored tract spectra in Figure A was generated from base pairs of sequence alignment simulated with Hudson R (2002). The IBS tracts are shared between two populations of constant size 10,000 that diverged 2,000 generations ago (= ts), with one haplotype sampled from each population. 5% of the genetic material from one population is the product of a recent admixture pulse from the other population. Figure B illustrates the history being simulated. When the admixture occurred less than 1,000 generations ago, it noticeably increases the abundance of long IBS tracts. The gray lines in Figure A are theoretical tract abundance predictions, and fit the simulated data extremely well. To smooth out noise in the simulated data, abundances are averaged over intervals with exponentially spaced endpoints .
Date Published: June 6, 2013
Source Harris K, Nielsen R (2013) Inferring Demographic History from a Spectrum of Shared Haplotype Lengths. PLoS Genet 9(6): e1003521. doi:10.1371/journal.pgen.1003521 http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1003521
Author Kelley Harris , Rasmus Nielsen
Other versions
An eight base-pair tract of IBS
Shared IBS tracts within bottlenecked populations
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